Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 SNORA68.1-201ENST00000364537 132 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-768P-201ENST00000384683 107 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 MIR483-201ENST00000385070 76 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 SNORA75.5-201ENST00000391291 81 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AL355796.1-201ENST00000406706 323 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC010154.1-201ENST00000425857 269 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 RN7SL442P-201ENST00000473804 320 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC010598.1-201ENST00000510378 103 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 RNU4-57P-201ENST00000515980 135 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-561P-201ENST00000516222 102 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC109329.2-201ENST00000519658 482 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AP001328.1-201ENST00000528550 176 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC127455.1-201ENST00000565496 145 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AP003355.3-201ENST00000623465 114 ntBASIC3.5□□□□□ -1.85
TRIM56Q9BRZ2 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 RNU1-72P-201ENST00000362976 153 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 SNORD31B-201ENST00000364977 69 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 SNORA9-201ENST00000384215 133 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 MIR183-201ENST00000384958 110 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 MIR34B-201ENST00000385076 84 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 AL035461.1-201ENST00000421490 332 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 RPL30P4-201ENST00000429309 333 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 RPL27AP5-201ENST00000469428 449 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 AC092991.1-201ENST00000477176 376 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 AC104619.4-201ENST00000510773 249 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 Y_RNA.686-201ENST00000516548 134 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 POLR3GP1-201ENST00000594073 261 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 U7.2-201ENST00000607576 63 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 AC096577.2-201ENST00000611455 153 ntBASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM56Q9BRZ2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-1180P-201ENST00000364935 107 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 CYP2C59P-201ENST00000457790 269 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-221P-201ENST00000459541 99 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 RN7SKP179-201ENST00000516126 217 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AC005972.2-201ENST00000604690 348 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 U3.45-201ENST00000607547 219 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 MIR5739-201ENST00000619803 80 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AC012640.5-201ENST00000623897 319 ntBASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM56Q9BRZ2 AC093908.1-201ENST00000623125 8092 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 ZNF702P-202ENST00000434269 1966 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 MFSD8-233ENST00000641482 4860 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-975P-201ENST00000384296 105 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 SNORD116-13-201ENST00000384408 92 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 MIR491-201ENST00000384877 84 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-460P-201ENST00000391158 108 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RNA5SP496-201ENST00000391240 109 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 AL512604.1-201ENST00000404812 257 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-437P-201ENST00000459408 95 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RPL23AP54-201ENST00000495129 419 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RN7SKP18-201ENST00000516005 275 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 RNU2-34P-201ENST00000516534 121 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 MIR3200-201ENST00000580767 85 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 U6.105-201ENST00000637379 88 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 MIR7515-201ENST00000637837 67 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 CENPCP1-201ENST00000533085 2578 ntBASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM56Q9BRZ2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM56Q9BRZ2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-944P-201ENST00000364023 107 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 RNA5SP72-201ENST00000364442 117 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-1325P-201ENST00000364905 105 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms