Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 AL161722.3-201ENST00000605789 2983 ntBASIC3.11□□□□□ -1.91
KRTAP1-3Q8IUG1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
KRTAP1-3Q8IUG1 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP1-3Q8IUG1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP1-3Q8IUG1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.11□□□□□ -1.91
KRTAP1-3Q8IUG1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 RNU1-140P-201ENST00000365040 165 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 MIR660-201ENST00000385235 97 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 SNORA71B-202ENST00000439232 272 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 RPS29P28-201ENST00000446439 141 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 SNRPGP7-201ENST00000469016 106 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 UBE2DNL-203ENST00000474922 222 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 AC018868.1-201ENST00000491307 315 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 RNU2-27P-201ENST00000516185 142 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 SNORA70.18-201ENST00000516696 98 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 U4.6-201ENST00000621618 127 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 AC005261.2-201ENST00000593427 4258 ntBASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP1-3Q8IUG1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AC010680.1-201ENST00000590024 3590 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 RNU4-7P-201ENST00000364758 141 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 RNU6-520P-201ENST00000384717 104 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 RN7SKP200-201ENST00000410564 320 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AC004866.1-201ENST00000411748 78 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AC012308.1-201ENST00000451232 178 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 RNU6-63P-201ENST00000516690 95 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 SNORA31.19-201ENST00000517079 126 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 FAM106DP-201ENST00000586416 501 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 AC131238.1-201ENST00000617135 328 ntBASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP1-3Q8IUG1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP1-3Q8IUG1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP1-3Q8IUG1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP1-3Q8IUG1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP1-3Q8IUG1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP1-3Q8IUG1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 SNORA27.1-201ENST00000362604 124 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU6-604P-201ENST00000390917 100 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RPL23AP48-201ENST00000406913 488 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU6-602P-201ENST00000411155 105 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AC069218.2-201ENST00000411665 344 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 Z85995.1-201ENST00000415547 335 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 POLR2J4-204ENST00000418424 324 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 HMGN2P27-201ENST00000427352 270 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RN7SKP46-201ENST00000515942 234 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNA5SP208-201ENST00000516156 78 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU1-117P-201ENST00000517041 158 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 EIF4BP1-201ENST00000554881 351 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AC078899.2-201ENST00000595282 212 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.08□□□□□ -1.92
KRTAP1-3Q8IUG1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 SNORD115-2-201ENST00000362842 82 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 SNORA38.1-201ENST00000364172 131 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU6-268P-201ENST00000364174 107 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 SNORA2B-201ENST00000384583 137 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 RNA5SP511-201ENST00000410487 115 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU7-80P-201ENST00000459562 61 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 AC027176.1-201ENST00000560204 514 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 MIR548AE2-201ENST00000583456 67 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 JPX_2.1-201ENST00000614161 69 ntBASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP1-3Q8IUG1 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms