Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 CRYGFP-201ENST00000418459 633 ntBASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 TSPY21P-201ENST00000433481 731 ntBASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 AC073912.3-201ENST00000624414 853 ntBASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLCA3PQ9Y6N3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 MMP23A-201ENST00000234610 1017 ntBASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCA3PQ9Y6N3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 PRSS44-201ENST00000515154 1146 ntBASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 FITM1-202ENST00000559294 800 ntBASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCA3PQ9Y6N3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 AP005242.2-201ENST00000580065 1175 ntBASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 AC096733.2-201ENST00000609937 1394 ntBASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCA3PQ9Y6N3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms