Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ESRRAP1-201ENST00000400596 1257 ntBASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 AC026366.1-201ENST00000488803 879 ntBASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 UNC93B4-201ENST00000505679 747 ntBASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 TSPY20P-201ENST00000450910 630 ntBASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
R3HCC1Q9Y3T6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 KRT17P3-201ENST00000420566 1262 ntBASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 KRT16P6-202ENST00000425692 1426 ntBASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 POU5F1P3-201ENST00000428824 1078 ntBASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
R3HCC1Q9Y3T6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 MIR4651-201ENST00000582622 73 ntBASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 AC008687.6-201ENST00000596318 630 ntBASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.58■■□□□ 1.05
R3HCC1Q9Y3T6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HCC1Q9Y3T6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HCC1Q9Y3T6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HCC1Q9Y3T6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms