Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 RPSAP43-201ENST00000402237 625 ntBASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCN4Q9Y3Q4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 AC099336.1-202ENST00000602961 463 ntBASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 AC112497.1-201ENST00000624824 639 ntBASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 MIR2861-201ENST00000636310 90 ntBASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCN4Q9Y3Q4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 DNAJB3-201ENST00000446806 729 ntBASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 CYMP-203ENST00000474680 1263 ntBASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCN4Q9Y3Q4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 COX20P2-201ENST00000452636 358 ntBASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 Z85996.1-201ENST00000494644 937 ntBASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 PTBP1P-201ENST00000554374 1601 ntBASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.35■□□□□ 0.69
HCN4Q9Y3Q4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 AC243591.1-201ENST00000452967 1364 ntBASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCN4Q9Y3Q4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms