Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.29■□□□□ 0.36
TPRKBQ9Y3C4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 UBE2DNL-204ENST00000602536 740 ntBASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPRKBQ9Y3C4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 AC134043.2-201ENST00000624206 2238 ntBASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.27■□□□□ 0.36
TPRKBQ9Y3C4 AC004854.2-201ENST00000608450 1441 ntBASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TPRKBQ9Y3C4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
TPRKBQ9Y3C4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms