Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RCL1Q9Y2P8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 AC073592.3-201ENST00000625118 1834 ntBASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 FEM1AP3-201ENST00000403722 1741 ntBASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RCL1Q9Y2P8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 AC126763.1-201ENST00000552015 2118 ntBASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 AL355472.2-201ENST00000422958 438 ntBASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.47■□□□□ 0.07
RCL1Q9Y2P8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 AL162741.1-201ENST00000565563 1558 ntBASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RCL1Q9Y2P8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms