Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 KRT8P11-201ENST00000409686 1436 ntBASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 AL590326.2-201ENST00000625139 305 ntBASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPH3AQ9Y2J0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPH3AQ9Y2J0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 NAPSB-206ENST00000562112 1266 ntBASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPH3AQ9Y2J0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPH3AQ9Y2J0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPH3AQ9Y2J0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms