Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RNF6Q9Y252 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF6Q9Y252 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF6Q9Y252 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
RNF6Q9Y252 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF6Q9Y252 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF6Q9Y252 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF6Q9Y252 LTB4R2-202ENST00000528054 3092 ntBASIC17.83■□□□□ 0.44
RNF6Q9Y252 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 KRT8P20-201ENST00000423953 1409 ntBASIC17.82■□□□□ 0.44
RNF6Q9Y252 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.82■□□□□ 0.44
RNF6Q9Y252 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF6Q9Y252 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF6Q9Y252 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.81■□□□□ 0.44
RNF6Q9Y252 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 AC135050.7-201ENST00000624508 2218 ntBASIC17.81■□□□□ 0.44
RNF6Q9Y252 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF6Q9Y252 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF6Q9Y252 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 HTR7P1-201ENST00000538670 1336 ntBASIC17.8■□□□□ 0.44
RNF6Q9Y252 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 AC124283.5-201ENST00000624661 1809 ntBASIC17.8■□□□□ 0.44
RNF6Q9Y252 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 AC026471.5-201ENST00000615068 467 ntBASIC17.8■□□□□ 0.44
RNF6Q9Y252 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
RNF6Q9Y252 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF6Q9Y252 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms