Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC007663.1-201ENST00000438948 1240 ntBASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NPIPA1Q9UND3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPIPA1Q9UND3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 AC005332.7-201ENST00000614046 2005 ntBASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.45■□□□□ 0.38
NPIPA1Q9UND3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 AC117947.1-201ENST00000427448 529 ntBASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 LINC01238-205ENST00000567549 1107 ntBASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 AC139887.4-201ENST00000607877 719 ntBASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 AC010653.2-201ENST00000623505 997 ntBASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPA1Q9UND3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 TSPY17P-201ENST00000450329 467 ntBASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 AC022616.7-201ENST00000525383 220 ntBASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NPIPA1Q9UND3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms