Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 AC087388.1-201ENST00000571370 1112 ntBASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCF1Q9UBD9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 AL023284.2-201ENST00000405850 579 ntBASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 AC140113.3-201ENST00000605663 199 ntBASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCF1Q9UBD9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 HOMER2P1-201ENST00000455653 964 ntBASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCF1Q9UBD9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 MCCD1P1-208ENST00000445732 328 ntBASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 AC141586.3-201ENST00000562166 1838 ntBASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 AFG3L1P-217ENST00000557444 2447 ntBASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCF1Q9UBD9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCF1Q9UBD9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms