Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 AC018712.1-201ENST00000455767 687 ntBASIC20.07■□□□□ 0.8
CHD7Q9P2D1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 MIR7706-201ENST00000613747 67 ntBASIC20.07■□□□□ 0.8
CHD7Q9P2D1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD7Q9P2D1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 NSUN5P1-202ENST00000421140 1535 ntBASIC20.06■□□□□ 0.8
CHD7Q9P2D1 NSUN5P2-203ENST00000457352 1529 ntBASIC20.06■□□□□ 0.8
CHD7Q9P2D1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 AL390719.2-201ENST00000606993 987 ntBASIC20.06■□□□□ 0.8
CHD7Q9P2D1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 MIR3180-5-201ENST00000583743 153 ntBASIC20.06■□□□□ 0.8
CHD7Q9P2D1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 AL137060.1-201ENST00000618151 2648 ntBASIC20.06■□□□□ 0.8
CHD7Q9P2D1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
CHD7Q9P2D1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AC139887.3-201ENST00000568585 713 ntBASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AC112497.1-201ENST00000624824 639 ntBASIC20.05■□□□□ 0.8
CHD7Q9P2D1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AC064862.7-201ENST00000604520 867 ntBASIC20.05■□□□□ 0.8
CHD7Q9P2D1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD7Q9P2D1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 AC106730.1-201ENST00000566722 1090 ntBASIC20.04■□□□□ 0.8
CHD7Q9P2D1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 AC009237.14-201ENST00000609975 1594 ntBASIC20.04■□□□□ 0.8
CHD7Q9P2D1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD7Q9P2D1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD7Q9P2D1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms