Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NCKIPSDQ9NZQ3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NCKIPSDQ9NZQ3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
NCKIPSDQ9NZQ3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 AC005521.1-201ENST00000393351 872 ntBASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 AP005242.2-201ENST00000580065 1175 ntBASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 AL445228.2-201ENST00000605589 952 ntBASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 KRT8P9-201ENST00000558927 1449 ntBASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NCKIPSDQ9NZQ3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 AC010947.1-201ENST00000623454 693 ntBASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCKIPSDQ9NZQ3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NCKIPSDQ9NZQ3 LETM1P2-201ENST00000597330 2178 ntBASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 ARMC10P1-201ENST00000313754 855 ntBASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms