Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NDE1Q9NXR1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ESPNP-201ENST00000270691 2015 ntBASIC18.3■□□□□ 0.52
NDE1Q9NXR1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NDE1Q9NXR1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NDE1Q9NXR1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.28■□□□□ 0.52
NDE1Q9NXR1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms