Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 AL645608.8-201ENST00000606034 2086 ntBASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 AC083906.6-201ENST00000641366 219 ntBASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AC084018.2-201ENST00000613093 2607 ntBASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AC012317.2-201ENST00000623305 2251 ntBASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AC133552.2-202ENST00000575694 574 ntBASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AC022517.1-201ENST00000592429 346 ntBASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 AL050303.2-201ENST00000619798 666 ntBASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPTLC3Q9NUV7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 AC124283.5-201ENST00000624661 1809 ntBASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 AC080080.1-201ENST00000625121 2420 ntBASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPTLC3Q9NUV7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 BX276092.2-201ENST00000417668 665 ntBASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPTLC3Q9NUV7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.81■□□□□ 0.92
SPTLC3Q9NUV7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms