Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC092368.3-202ENST00000574180 1591 ntBASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC104581.1-202ENST00000635932 2618 ntBASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AL161938.1-201ENST00000569833 2180 ntBASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 TSPY6P-201ENST00000448518 926 ntBASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 AL109923.1-201ENST00000618799 583 ntBASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 TEX21P-204ENST00000641479 1693 ntBASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB16Q9NRJ7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 TUBB8P6-201ENST00000436895 1288 ntBASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 AL121829.2-201ENST00000620908 328 ntBASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms