Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 RPS2P4-201ENST00000476944 856 ntBASIC17.58■□□□□ 0.4
POLE3Q9NRF9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 AF186192.3-201ENST00000583427 947 ntBASIC17.58■□□□□ 0.4
POLE3Q9NRF9 FAM197Y4-202ENST00000622692 608 ntBASIC17.58■□□□□ 0.4
POLE3Q9NRF9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLE3Q9NRF9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 AC004951.3-201ENST00000418645 1148 ntBASIC17.57■□□□□ 0.4
POLE3Q9NRF9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 Z98044.1-201ENST00000632503 1764 ntBASIC17.57■□□□□ 0.4
POLE3Q9NRF9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.57■□□□□ 0.4
POLE3Q9NRF9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 TSPY20P-201ENST00000450910 630 ntBASIC17.56■□□□□ 0.4
POLE3Q9NRF9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 RCC2P6-201ENST00000526625 1557 ntBASIC17.56■□□□□ 0.4
POLE3Q9NRF9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.56■□□□□ 0.4
POLE3Q9NRF9 KRT8P11-201ENST00000409686 1436 ntBASIC17.55■□□□□ 0.4
POLE3Q9NRF9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 AC004408.2-201ENST00000623613 2777 ntBASIC17.55■□□□□ 0.4
POLE3Q9NRF9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms