Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.86■□□□□ 0.77
CD248Q9HCU0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 KRT16P6-202ENST00000425692 1426 ntBASIC19.85■□□□□ 0.77
CD248Q9HCU0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD248Q9HCU0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CD248Q9HCU0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 AC092720.2-201ENST00000602388 1665 ntBASIC19.84■□□□□ 0.77
CD248Q9HCU0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 KRT18P22-201ENST00000402024 1347 ntBASIC19.84■□□□□ 0.77
CD248Q9HCU0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 AP005242.2-201ENST00000580065 1175 ntBASIC19.84■□□□□ 0.77
CD248Q9HCU0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.84■□□□□ 0.77
CD248Q9HCU0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CD248Q9HCU0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD248Q9HCU0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD248Q9HCU0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD248Q9HCU0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD248Q9HCU0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD248Q9HCU0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 SLC25A3P1-201ENST00000443844 931 ntBASIC19.83■□□□□ 0.77
CD248Q9HCU0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD248Q9HCU0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 DGCR10-201ENST00000609839 495 ntBASIC19.83■□□□□ 0.77
CD248Q9HCU0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.83■□□□□ 0.77
CD248Q9HCU0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.83■□□□□ 0.76
CD248Q9HCU0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD248Q9HCU0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.83■□□□□ 0.76
CD248Q9HCU0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD248Q9HCU0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD248Q9HCU0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CD248Q9HCU0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CD248Q9HCU0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD248Q9HCU0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD248Q9HCU0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.82■□□□□ 0.76
CD248Q9HCU0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms