Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VAT1LQ9HCJ6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 MIR4674-201ENST00000582457 87 ntBASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 AC010331.1-201ENST00000611423 582 ntBASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VAT1LQ9HCJ6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 AL138966.2-201ENST00000621997 464 ntBASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
VAT1LQ9HCJ6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 FP475955.4-201ENST00000623131 1990 ntBASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VAT1LQ9HCJ6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 GPAT2P1-201ENST00000444924 1672 ntBASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VAT1LQ9HCJ6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AL049597.2-201ENST00000565575 961 ntBASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AC139887.4-201ENST00000607877 719 ntBASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AC006011.2-201ENST00000621313 1158 ntBASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AC141257.4-201ENST00000634557 245 ntBASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 AC136944.6-201ENST00000634818 245 ntBASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VAT1LQ9HCJ6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
VAT1LQ9HCJ6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms