Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
POLR1BQ9H9Y6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
POLR1BQ9H9Y6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
POLR1BQ9H9Y6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 RNF152P1-201ENST00000397754 604 ntBASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 AC116562.4-202ENST00000641738 218 ntBASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLR1BQ9H9Y6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 TFP1-202ENST00000475455 1573 ntBASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.69■□□□□ 0.58
POLR1BQ9H9Y6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 AC020763.4-201ENST00000623414 4170 ntBASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 CCR12P-201ENST00000446203 998 ntBASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 AC091390.4-202ENST00000476426 537 ntBASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 MYC-208ENST00000641036 567 ntBASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR1BQ9H9Y6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms