Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AP006587.1-201ENST00000534129 1502 ntBASIC18.08■□□□□ 0.48
PIF1Q9H611 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.08■□□□□ 0.48
PIF1Q9H611 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PIF1Q9H611 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PIF1Q9H611 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PIF1Q9H611 MIPEPP3-201ENST00000412105 444 ntBASIC18.07■□□□□ 0.48
PIF1Q9H611 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.07■□□□□ 0.48
PIF1Q9H611 AL109923.1-201ENST00000618799 583 ntBASIC18.07■□□□□ 0.48
PIF1Q9H611 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PIF1Q9H611 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PIF1Q9H611 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 AL354751.1-201ENST00000412768 1863 ntBASIC18.07■□□□□ 0.48
PIF1Q9H611 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PIF1Q9H611 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PIF1Q9H611 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PIF1Q9H611 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.06■□□□□ 0.48
PIF1Q9H611 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PIF1Q9H611 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.06■□□□□ 0.48
PIF1Q9H611 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.06■□□□□ 0.48
PIF1Q9H611 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.06■□□□□ 0.48
PIF1Q9H611 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.06■□□□□ 0.48
PIF1Q9H611 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.06■□□□□ 0.48
PIF1Q9H611 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.06■□□□□ 0.48
PIF1Q9H611 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PIF1Q9H611 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.06■□□□□ 0.48
PIF1Q9H611 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PIF1Q9H611 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
PIF1Q9H611 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 ID1-201ENST00000376105 1233 ntBASIC18.05■□□□□ 0.48
PIF1Q9H611 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 AC142086.2-201ENST00000569753 217 ntBASIC18.05■□□□□ 0.48
PIF1Q9H611 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.05■□□□□ 0.48
PIF1Q9H611 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PIF1Q9H611 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.05■□□□□ 0.48
PIF1Q9H611 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.05■□□□□ 0.48
PIF1Q9H611 FEM1AP3-201ENST00000403722 1741 ntBASIC18.05■□□□□ 0.48
PIF1Q9H611 ANO7L1-203ENST00000602586 1720 ntBASIC18.05■□□□□ 0.48
PIF1Q9H611 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PIF1Q9H611 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PIF1Q9H611 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms