Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.67■□□□□ 0.26
SLIRPQ9GZT3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.66■□□□□ 0.26
SLIRPQ9GZT3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 RARRES2P1-201ENST00000474487 481 ntBASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLIRPQ9GZT3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLIRPQ9GZT3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLIRPQ9GZT3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLIRPQ9GZT3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 AC023632.3-201ENST00000521633 145 ntBASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 AC024257.2-201ENST00000549699 147 ntBASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLIRPQ9GZT3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms