Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSER1Q9C0I3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSER1Q9C0I3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSER1Q9C0I3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 TSPY7P-201ENST00000431358 1114 ntBASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 CA15P1-201ENST00000481698 905 ntBASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.16■□□□□ 0.98
CCSER1Q9C0I3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 AP005242.2-201ENST00000580065 1175 ntBASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 MIR4785-201ENST00000585005 73 ntBASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 AC008622.2-201ENST00000617006 1229 ntBASIC21.15■□□□□ 0.98
CCSER1Q9C0I3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms