Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 MIR770-201ENST00000390219 98 ntBASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 MIR1199-201ENST00000621445 119 ntBASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 NUS1P2-201ENST00000417358 873 ntBASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 Z69720.1-201ENST00000601483 472 ntBASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 AL596442.2-201ENST00000610240 980 ntBASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNTNAP3Q9BZ76 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 AC104109.2-201ENST00000602919 1418 ntBASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 SEC1P-202ENST00000473944 940 ntBASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 IGHV3-22-201ENST00000520721 359 ntBASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 AC116407.3-201ENST00000623905 1129 ntBASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CNTNAP3Q9BZ76 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 AC092667.1-201ENST00000434301 2586 ntBASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 AC079602.3-201ENST00000623931 403 ntBASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNTNAP3Q9BZ76 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.97■□□□□ 0.47
CNTNAP3Q9BZ76 MIR662-201ENST00000384847 95 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms