Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
KRTAP4-3Q9BYR4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ANKRD20A18P-201ENST00000359341 492 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AL023284.2-201ENST00000405850 579 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 SAPCD2P2-201ENST00000431719 1174 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 SPDYE13P-201ENST00000445314 798 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC092647.4-201ENST00000457211 535 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM86EP-206ENST00000510506 987 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PRSS44-201ENST00000515154 1146 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC140113.3-201ENST00000605663 199 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC024243.1-201ENST00000609234 778 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC010653.2-201ENST00000623505 997 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 AC012313.10-201ENST00000623509 926 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 IRX1P1-201ENST00000438849 1838 ntBASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC6.43□□□□□ -1.38
KRTAP4-3Q9BYR4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
KRTAP4-3Q9BYR4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC6.42□□□□□ -1.38
KRTAP4-3Q9BYR4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms