Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 AC064862.7-201ENST00000604520 867 ntBASIC19.11■□□□□ 0.65
PHOX2BQ99453 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
PHOX2BQ99453 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHOX2BQ99453 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 AC093525.10-201ENST00000625130 1569 ntBASIC19.1■□□□□ 0.65
PHOX2BQ99453 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.1■□□□□ 0.65
PHOX2BQ99453 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 HLA-J-202ENST00000469281 1241 ntBASIC19.1■□□□□ 0.65
PHOX2BQ99453 AC104819.1-201ENST00000504587 486 ntBASIC19.1■□□□□ 0.65
PHOX2BQ99453 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 AC148477.8-201ENST00000624298 468 ntBASIC19.1■□□□□ 0.65
PHOX2BQ99453 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PHOX2BQ99453 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHOX2BQ99453 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHOX2BQ99453 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHOX2BQ99453 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHOX2BQ99453 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHOX2BQ99453 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 AL031284.1-201ENST00000419297 478 ntBASIC19.09■□□□□ 0.65
PHOX2BQ99453 HTR5BP-201ENST00000430851 1154 ntBASIC19.09■□□□□ 0.65
PHOX2BQ99453 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 PLK5-205ENST00000642079 1969 ntBASIC19.09■□□□□ 0.65
PHOX2BQ99453 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHOX2BQ99453 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.09■□□□□ 0.65
PHOX2BQ99453 KRT8P17-201ENST00000453110 1448 ntBASIC19.08■□□□□ 0.65
PHOX2BQ99453 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PHOX2BQ99453 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHOX2BQ99453 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHOX2BQ99453 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHOX2BQ99453 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 SAPCD2P3-201ENST00000455031 850 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 RPL13AP23-201ENST00000480739 586 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 SART3-203ENST00000546611 1184 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 AC074051.2-201ENST00000565115 352 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHOX2BQ99453 AC010327.4-202ENST00000591484 748 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 AC239800.4-201ENST00000603712 296 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 AC112497.1-201ENST00000624824 639 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHOX2BQ99453 AC018553.1-201ENST00000616682 1458 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.08■□□□□ 0.64
PHOX2BQ99453 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHOX2BQ99453 LINC00167-201ENST00000530583 1419 ntBASIC19.08■□□□□ 0.64
PHOX2BQ99453 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHOX2BQ99453 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 FAM197Y8-203ENST00000450145 560 ntBASIC19.07■□□□□ 0.64
PHOX2BQ99453 HLA-J-203ENST00000494367 1087 ntBASIC19.07■□□□□ 0.64
PHOX2BQ99453 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 AC099336.1-202ENST00000602961 463 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms