Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ODF3Q96PU9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ODF3Q96PU9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 KRT8P11-201ENST00000409686 1436 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 HTR7P1-201ENST00000538670 1336 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 RCC2P6-201ENST00000526625 1557 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 AC004951.3-201ENST00000418645 1148 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 AC006058.3-201ENST00000606217 1069 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 KRT16P1-201ENST00000399124 1418 ntBASIC13.98□□□□□ -0.17
ODF3Q96PU9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.98□□□□□ -0.17
ODF3Q96PU9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ODF3Q96PU9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 RARRES2P10-201ENST00000564312 460 ntBASIC13.97□□□□□ -0.17
ODF3Q96PU9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
ODF3Q96PU9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ODF3Q96PU9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 KRT8P32-201ENST00000512863 1461 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms