Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 HMGA1P5-201ENST00000412453 271 ntBASIC14.72□□□□□ -0.05
DUX3Q96PT4 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 WWOX-216ENST00000569818 525 ntBASIC14.72□□□□□ -0.05
DUX3Q96PT4 NTF6B-201ENST00000591913 560 ntBASIC14.72□□□□□ -0.05
DUX3Q96PT4 AL590326.2-201ENST00000625139 305 ntBASIC14.72□□□□□ -0.05
DUX3Q96PT4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
DUX3Q96PT4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
DUX3Q96PT4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 AC092338.2-201ENST00000568827 1415 ntBASIC14.71□□□□□ -0.05
DUX3Q96PT4 AL158211.5-201ENST00000623583 2518 ntBASIC14.71□□□□□ -0.05
DUX3Q96PT4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.71□□□□□ -0.05
DUX3Q96PT4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DUX3Q96PT4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DUX3Q96PT4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DUX3Q96PT4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DUX3Q96PT4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.71□□□□□ -0.06
DUX3Q96PT4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DUX3Q96PT4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
DUX3Q96PT4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AP003041.3-201ENST00000527151 707 ntBASIC14.7□□□□□ -0.06
DUX3Q96PT4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AC139887.4-201ENST00000607877 719 ntBASIC14.7□□□□□ -0.06
DUX3Q96PT4 AL023803.3-201ENST00000615559 522 ntBASIC14.7□□□□□ -0.06
DUX3Q96PT4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.7□□□□□ -0.06
DUX3Q96PT4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DUX3Q96PT4 AC120498.9-201ENST00000339021 3867 ntBASIC14.69□□□□□ -0.06
DUX3Q96PT4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DUX3Q96PT4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
DUX3Q96PT4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms