Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAFA1Q96PS6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 SLC25A1P2-201ENST00000430693 912 ntBASIC15.74■□□□□ 0.11
GAFA1Q96PS6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 NAPSB-206ENST00000562112 1266 ntBASIC15.74■□□□□ 0.11
GAFA1Q96PS6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 AC008622.2-201ENST00000617006 1229 ntBASIC15.74■□□□□ 0.11
GAFA1Q96PS6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 AC010947.1-201ENST00000623454 693 ntBASIC15.74■□□□□ 0.11
GAFA1Q96PS6 AC083906.6-201ENST00000641366 219 ntBASIC15.74■□□□□ 0.11
GAFA1Q96PS6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.74■□□□□ 0.11
GAFA1Q96PS6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 AL512353.2-201ENST00000448759 1962 ntBASIC15.73■□□□□ 0.11
GAFA1Q96PS6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.73■□□□□ 0.11
GAFA1Q96PS6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 AL023803.3-201ENST00000615559 522 ntBASIC15.73■□□□□ 0.11
GAFA1Q96PS6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 AC087289.5-201ENST00000586076 3175 ntBASIC15.73■□□□□ 0.11
GAFA1Q96PS6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
GAFA1Q96PS6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 TSPY14P-201ENST00000303979 915 ntBASIC15.72■□□□□ 0.11
GAFA1Q96PS6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 AC087499.1-201ENST00000418141 1075 ntBASIC15.72■□□□□ 0.11
GAFA1Q96PS6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 CCR12P-201ENST00000446203 998 ntBASIC15.72■□□□□ 0.11
GAFA1Q96PS6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 AC120498.9-201ENST00000339021 3867 ntBASIC15.72■□□□□ 0.11
GAFA1Q96PS6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms