Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 AL161938.1-201ENST00000569833 2180 ntBASIC19.5■□□□□ 0.71
RPRD1AQ96P16 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 KRT8P3-201ENST00000519669 1449 ntBASIC19.5■□□□□ 0.71
RPRD1AQ96P16 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPRD1AQ96P16 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 AL137013.1-201ENST00000432946 1228 ntBASIC19.49■□□□□ 0.71
RPRD1AQ96P16 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.49■□□□□ 0.71
RPRD1AQ96P16 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 AC008622.2-201ENST00000617006 1229 ntBASIC19.49■□□□□ 0.71
RPRD1AQ96P16 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.49■□□□□ 0.71
RPRD1AQ96P16 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.48■□□□□ 0.71
RPRD1AQ96P16 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 AC005521.1-201ENST00000393351 872 ntBASIC19.48■□□□□ 0.71
RPRD1AQ96P16 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 LIN28AP1-201ENST00000429574 405 ntBASIC19.48■□□□□ 0.71
RPRD1AQ96P16 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.48■□□□□ 0.71
RPRD1AQ96P16 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 TERF1P1-201ENST00000311003 1181 ntBASIC19.47■□□□□ 0.71
RPRD1AQ96P16 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 ATP5G1P1-201ENST00000448724 379 ntBASIC19.47■□□□□ 0.71
RPRD1AQ96P16 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 KRT18P21-201ENST00000515767 1272 ntBASIC19.47■□□□□ 0.71
RPRD1AQ96P16 AC010203.1-204ENST00000548782 407 ntBASIC19.47■□□□□ 0.71
RPRD1AQ96P16 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RPRD1AQ96P16 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms