Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC46A1Q96NT5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 AFG3L1P-217ENST00000557444 2447 ntBASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 TSPY21P-201ENST00000433481 731 ntBASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 TSPY23P-201ENST00000440136 739 ntBASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC46A1Q96NT5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 AC092329.2-201ENST00000598402 547 ntBASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC46A1Q96NT5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC46A1Q96NT5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC46A1Q96NT5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC46A1Q96NT5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC46A1Q96NT5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 MIR4674-201ENST00000582457 87 ntBASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC46A1Q96NT5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC46A1Q96NT5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms