Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 HBZP1-201ENST00000354915 429 ntBASIC18.96■□□□□ 0.63
SIPA1Q96FS4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 Z82202.1-201ENST00000623446 1880 ntBASIC18.96■□□□□ 0.63
SIPA1Q96FS4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIPA1Q96FS4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.95■□□□□ 0.62
SIPA1Q96FS4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.95■□□□□ 0.62
SIPA1Q96FS4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIPA1Q96FS4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 LINC01521-201ENST00000504184 1943 ntBASIC18.94■□□□□ 0.62
SIPA1Q96FS4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.94■□□□□ 0.62
SIPA1Q96FS4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SIPA1Q96FS4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms