Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 IER3-202ENST00000376377 1350 ntBASIC20.49■□□□□ 0.87
PGBD4Q96DM1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 MCCD1P1-208ENST00000445732 328 ntBASIC20.49■□□□□ 0.87
PGBD4Q96DM1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.49■□□□□ 0.87
PGBD4Q96DM1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD4Q96DM1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.48■□□□□ 0.87
PGBD4Q96DM1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 AC034232.1-201ENST00000506026 1064 ntBASIC20.47■□□□□ 0.87
PGBD4Q96DM1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 AL136038.3-201ENST00000561909 1096 ntBASIC20.47■□□□□ 0.87
PGBD4Q96DM1 MIR3180-5-201ENST00000583743 153 ntBASIC20.47■□□□□ 0.87
PGBD4Q96DM1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.47■□□□□ 0.87
PGBD4Q96DM1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 VENTXP5-201ENST00000523979 775 ntBASIC20.46■□□□□ 0.87
PGBD4Q96DM1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 ZNF444P1-201ENST00000559497 298 ntBASIC20.46■□□□□ 0.87
PGBD4Q96DM1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 AC005332.1-201ENST00000577698 1310 ntBASIC20.46■□□□□ 0.87
PGBD4Q96DM1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PGBD4Q96DM1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms