Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.02■□□□□ 0.31
SNRNP40Q96DI7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNRNP40Q96DI7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 MIR662-201ENST00000384847 95 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AP000867.3-201ENST00000524675 377 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC091304.2-201ENST00000564639 760 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AL121772.3-201ENST00000610840 674 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AL031008.1-201ENST00000619963 541 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC112497.1-201ENST00000624824 639 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AL391807.1-203ENST00000604392 2365 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 SDHAP1-207ENST00000440850 2000 ntBASIC17.01■□□□□ 0.31
SNRNP40Q96DI7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 AL162377.1-201ENST00000618844 1793 ntBASIC17■□□□□ 0.31
SNRNP40Q96DI7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 LINC00265-3P-201ENST00000447588 903 ntBASIC17■□□□□ 0.31
SNRNP40Q96DI7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 TPSP2-201ENST00000561760 610 ntBASIC17■□□□□ 0.31
SNRNP40Q96DI7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNRNP40Q96DI7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 SLC25A24-204ENST00000569674 2357 ntBASIC17■□□□□ 0.31
SNRNP40Q96DI7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17■□□□□ 0.31
SNRNP40Q96DI7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 DRAXINP1-201ENST00000437611 948 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 AL160237.2-201ENST00000556165 472 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 MIR3917-201ENST00000580971 93 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 LINC01711-201ENST00000598340 967 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 AC104692.2-201ENST00000603054 253 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.99■□□□□ 0.31
SNRNP40Q96DI7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms