Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HPS1Q92902 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 PCDHA12-202ENST00000613593 2588 ntBASIC17.25■□□□□ 0.35
HPS1Q92902 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.25■□□□□ 0.35
HPS1Q92902 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HPS1Q92902 UNC93B5-201ENST00000530315 699 ntBASIC17.25■□□□□ 0.35
HPS1Q92902 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.25■□□□□ 0.35
HPS1Q92902 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.25■□□□□ 0.35
HPS1Q92902 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.25■□□□□ 0.35
HPS1Q92902 CYP2T3P-201ENST00000601990 817 ntBASIC17.25■□□□□ 0.35
HPS1Q92902 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.25■□□□□ 0.35
HPS1Q92902 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS1Q92902 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.25■□□□□ 0.35
HPS1Q92902 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
HPS1Q92902 OR6D1P-202ENST00000641007 5290 ntBASIC17.25■□□□□ 0.35
HPS1Q92902 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
HPS1Q92902 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HPS1Q92902 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS1Q92902 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS1Q92902 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 KRT18P68-201ENST00000392293 1000 ntBASIC17.24■□□□□ 0.35
HPS1Q92902 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.24■□□□□ 0.35
HPS1Q92902 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.24■□□□□ 0.35
HPS1Q92902 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS1Q92902 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS1Q92902 AC026366.1-201ENST00000488803 879 ntBASIC17.24■□□□□ 0.35
HPS1Q92902 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS1Q92902 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HPS1Q92902 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS1Q92902 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HPS1Q92902 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS1Q92902 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS1Q92902 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS1Q92902 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS1Q92902 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.23■□□□□ 0.35
HPS1Q92902 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS1Q92902 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms