Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.86■□□□□ 0.45
TM9SF4Q92544 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.86■□□□□ 0.45
TM9SF4Q92544 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM9SF4Q92544 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 NEFHP1-201ENST00000412845 2629 ntBASIC17.85■□□□□ 0.45
TM9SF4Q92544 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TM9SF4Q92544 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM9SF4Q92544 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.84■□□□□ 0.45
TM9SF4Q92544 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 AC022616.7-201ENST00000525383 220 ntBASIC17.84■□□□□ 0.45
TM9SF4Q92544 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 WWOX-216ENST00000569818 525 ntBASIC17.84■□□□□ 0.45
TM9SF4Q92544 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM9SF4Q92544 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TM9SF4Q92544 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF4Q92544 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF4Q92544 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF4Q92544 AP001271.2-201ENST00000624018 1556 ntBASIC17.83■□□□□ 0.45
TM9SF4Q92544 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF4Q92544 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM9SF4Q92544 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
TM9SF4Q92544 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 TSPY17P-201ENST00000450329 467 ntBASIC17.83■□□□□ 0.44
TM9SF4Q92544 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 AC091076.1-201ENST00000610741 619 ntBASIC17.83■□□□□ 0.44
TM9SF4Q92544 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.83■□□□□ 0.44
TM9SF4Q92544 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms