Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC3Q92529 AC026471.5-201ENST00000615068 467 ntBASIC20.2■□□□□ 0.82
SHC3Q92529 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC3Q92529 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC3Q92529 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC3Q92529 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC3Q92529 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.19■□□□□ 0.82
SHC3Q92529 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC3Q92529 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC3Q92529 WIZP1-201ENST00000531444 2299 ntBASIC20.19■□□□□ 0.82
SHC3Q92529 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SHC3Q92529 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC3Q92529 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SHC3Q92529 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.19■□□□□ 0.82
SHC3Q92529 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.19■□□□□ 0.82
SHC3Q92529 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
SHC3Q92529 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC3Q92529 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
SHC3Q92529 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHC3Q92529 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC3Q92529 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC3Q92529 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 AL355355.2-201ENST00000442321 338 ntBASIC20.18■□□□□ 0.82
SHC3Q92529 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.18■□□□□ 0.82
SHC3Q92529 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.18■□□□□ 0.82
SHC3Q92529 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.18■□□□□ 0.82
SHC3Q92529 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.18■□□□□ 0.82
SHC3Q92529 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.18■□□□□ 0.82
SHC3Q92529 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC3Q92529 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.18■□□□□ 0.82
SHC3Q92529 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
SHC3Q92529 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC3Q92529 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHC3Q92529 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC3Q92529 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHC3Q92529 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC3Q92529 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SHC3Q92529 MIR718-201ENST00000390190 70 ntBASIC20.17■□□□□ 0.82
SHC3Q92529 MFAP1P1-201ENST00000442257 1255 ntBASIC20.17■□□□□ 0.82
SHC3Q92529 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.17■□□□□ 0.82
SHC3Q92529 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.17■□□□□ 0.82
SHC3Q92529 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.17■□□□□ 0.82
SHC3Q92529 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC3Q92529 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC3Q92529 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC3Q92529 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC3Q92529 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHC3Q92529 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC3Q92529 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC3Q92529 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC3Q92529 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC3Q92529 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC3Q92529 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SHC3Q92529 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC3Q92529 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.16■□□□□ 0.82
SHC3Q92529 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms