Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 AC004870.1-201ENST00000315132 882 ntBASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 AL845331.1-201ENST00000424978 1190 ntBASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 KRT18P1-202ENST00000452408 1331 ntBASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RAPGEF4Q8WZA2 AL157384.1-201ENST00000445995 2473 ntBASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 NUS1P1-201ENST00000446295 882 ntBASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 UNC93B7-201ENST00000509439 705 ntBASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 RCC2P3-201ENST00000418112 1537 ntBASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RAPGEF4Q8WZA2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 KRT18P23-201ENST00000435622 1283 ntBASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 AL512353.2-201ENST00000448759 1962 ntBASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RAPGEF4Q8WZA2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 RNF126P1-202ENST00000569893 925 ntBASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 AC008556.1-201ENST00000610908 2040 ntBASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 KRT8P7-201ENST00000533003 1432 ntBASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RAPGEF4Q8WZA2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 FAAHP1-202ENST00000446499 1238 ntBASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.76■■□□□ 1.55
RAPGEF4Q8WZA2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms