Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.81■□□□□ 0.6
CKAP2Q8WWK9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CKAP2Q8WWK9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.81■□□□□ 0.6
CKAP2Q8WWK9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
CKAP2Q8WWK9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 AC069236.1-201ENST00000604339 616 ntBASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 BID-214ENST00000617586 542 ntTSL 5 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.8■□□□□ 0.6
CKAP2Q8WWK9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 AC010980.2-201ENST00000587099 1412 ntBASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKAP2Q8WWK9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 AC026271.2-201ENST00000428091 497 ntBASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 KRT18P11-201ENST00000435214 1283 ntBASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CKAP2Q8WWK9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 YBX1P10-201ENST00000444752 975 ntBASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 DUX4L16-201ENST00000555130 1264 ntBASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CKAP2Q8WWK9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms