Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AL121956.5-201ENST00000625261 221 ntBASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
SH3RF2Q8TEC5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 FAM86EP-206ENST00000510506 987 ntBASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.63■□□□□ 0.73
SH3RF2Q8TEC5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 GPAT2P1-201ENST00000444924 1672 ntBASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 AP000550.4-202ENST00000639755 178 ntBASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 Z82202.1-201ENST00000623446 1880 ntBASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3RF2Q8TEC5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 PCED1CP-201ENST00000419887 785 ntBASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SH3RF2Q8TEC5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 AL023284.2-201ENST00000405850 579 ntBASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.6■□□□□ 0.73
SH3RF2Q8TEC5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms