Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AL136116.3-201ENST00000402907 1138 ntBASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 GRAMD4P4-201ENST00000613563 1115 ntBASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 AL035685.1-201ENST00000636663 812 ntBASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00308Q8TCZ7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RASA4CP-201ENST00000424092 1398 ntBASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 MFSD11-216ENST00000590393 1141 ntBASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00308Q8TCZ7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 PCDHA12-202ENST00000613593 2588 ntBASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 AL356441.2-201ENST00000443009 864 ntBASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 YBX1P1-201ENST00000445822 960 ntBASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00308Q8TCZ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms