Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP3Q8IVE0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 CDV3P1-201ENST00000471403 739 ntBASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP3Q8IVE0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 AC011676.5-201ENST00000624864 2660 ntBASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 UNC93B3-201ENST00000308076 687 ntBASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 AC099791.1-201ENST00000416440 715 ntBASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CROCCP3Q8IVE0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CROCCP3Q8IVE0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 KRT18P20-201ENST00000548986 1279 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L2-201ENST00000561772 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L6-201ENST00000626483 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L1-201ENST00000627662 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L8-201ENST00000629013 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L3-201ENST00000630187 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L7-201ENST00000630678 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DUX4L5-201ENST00000630834 1275 ntBASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CROCCP3Q8IVE0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms