Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
SHFQ7M4L6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.11■□□□□ 0.33
SHFQ7M4L6 NCF1B-203ENST00000435988 1254 ntBASIC17.11■□□□□ 0.33
SHFQ7M4L6 TSPY6P-201ENST00000448518 926 ntBASIC17.11■□□□□ 0.33
SHFQ7M4L6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
SHFQ7M4L6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHFQ7M4L6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 AC060766.5-201ENST00000590539 871 ntBASIC17.1■□□□□ 0.33
SHFQ7M4L6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
SHFQ7M4L6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHFQ7M4L6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.09■□□□□ 0.33
SHFQ7M4L6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 MYC-209ENST00000641252 345 ntBASIC17.09■□□□□ 0.33
SHFQ7M4L6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHFQ7M4L6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.09■□□□□ 0.33
SHFQ7M4L6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms