Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 ECEL1P3-201ENST00000427961 737 ntBASIC17.74■□□□□ 0.43
RTL4Q6ZR62 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 Z85996.1-201ENST00000494644 937 ntBASIC17.74■□□□□ 0.43
RTL4Q6ZR62 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.74■□□□□ 0.43
RTL4Q6ZR62 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTL4Q6ZR62 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 TNXA-203ENST00000507684 2038 ntBASIC17.73■□□□□ 0.43
RTL4Q6ZR62 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.73■□□□□ 0.43
RTL4Q6ZR62 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RTL4Q6ZR62 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 FAM207BP-201ENST00000447172 505 ntBASIC17.72■□□□□ 0.43
RTL4Q6ZR62 AC097488.1-201ENST00000507834 756 ntBASIC17.72■□□□□ 0.43
RTL4Q6ZR62 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 AP005242.2-201ENST00000580065 1175 ntBASIC17.72■□□□□ 0.43
RTL4Q6ZR62 AP000692.2-201ENST00000608391 879 ntBASIC17.72■□□□□ 0.43
RTL4Q6ZR62 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTL4Q6ZR62 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTL4Q6ZR62 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms