Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NHLRC1Q6VVB1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 AC233702.5-201ENST00000584107 538 ntBASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 AL031985.4-201ENST00000642138 673 ntBASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 AC006333.2-201ENST00000607957 2099 ntBASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NHLRC1Q6VVB1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AC012618.2-201ENST00000428058 849 ntBASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NHLRC1Q6VVB1 CROCCP3-202ENST00000420820 1947 ntBASIC17■□□□□ 0.31
NHLRC1Q6VVB1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 AC004951.3-201ENST00000418645 1148 ntBASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 FAM197Y1-201ENST00000421178 764 ntBASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 AC116562.2-201ENST00000507042 360 ntBASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CD177P1-201ENST00000606252 935 ntBASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 AC113410.3-201ENST00000623366 203 ntBASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NHLRC1Q6VVB1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.98■□□□□ 0.31
NHLRC1Q6VVB1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms