Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 VENTXP5-201ENST00000523979 775 ntBASIC21.28■■□□□ 1
CCDC62Q6P9F0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC62Q6P9F0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC62Q6P9F0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.27■■□□□ 1
CCDC62Q6P9F0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC62Q6P9F0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
CCDC62Q6P9F0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.27■□□□□ 0.99
CCDC62Q6P9F0 AC036111.1-201ENST00000533973 1582 ntBASIC21.27■□□□□ 0.99
CCDC62Q6P9F0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.27■□□□□ 0.99
CCDC62Q6P9F0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 TEX21P-204ENST00000641479 1693 ntBASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 KRT18P56-201ENST00000507275 550 ntBASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC62Q6P9F0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 HBZP1-201ENST00000354915 429 ntBASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 RASA4DP-201ENST00000460726 1199 ntBASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 Z82202.1-201ENST00000623446 1880 ntBASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC62Q6P9F0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms