Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 AC135050.7-201ENST00000624508 2218 ntBASIC17.24■□□□□ 0.35
NIPAL3Q6P499 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 UBE2SP1-201ENST00000450587 669 ntBASIC17.23■□□□□ 0.35
NIPAL3Q6P499 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NIPAL3Q6P499 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.22■□□□□ 0.35
NIPAL3Q6P499 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms