Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT40Q6A162 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT40Q6A162 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
KRT40Q6A162 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 MESTP1-201ENST00000404287 994 ntBASIC21.92■■□□□ 1.1
KRT40Q6A162 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT40Q6A162 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT40Q6A162 B3GAT3P1-201ENST00000471720 806 ntBASIC21.92■■□□□ 1.1
KRT40Q6A162 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT40Q6A162 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT40Q6A162 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.92■■□□□ 1.1
KRT40Q6A162 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT40Q6A162 AC130371.2-201ENST00000619443 611 ntBASIC21.92■■□□□ 1.1
KRT40Q6A162 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT40Q6A162 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT40Q6A162 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KRT40Q6A162 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT40Q6A162 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT40Q6A162 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
KRT40Q6A162 MMP23A-201ENST00000234610 1017 ntBASIC21.91■■□□□ 1.1
KRT40Q6A162 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.91■■□□□ 1.1
KRT40Q6A162 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 MIR6786-201ENST00000616843 113 ntBASIC21.91■■□□□ 1.1
KRT40Q6A162 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 AC092865.7-201ENST00000641832 219 ntBASIC21.91■■□□□ 1.1
KRT40Q6A162 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
KRT40Q6A162 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT40Q6A162 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
KRT40Q6A162 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT40Q6A162 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT40Q6A162 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT40Q6A162 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
KRT40Q6A162 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
KRT40Q6A162 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT40Q6A162 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT40Q6A162 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KRT40Q6A162 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT40Q6A162 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KRT40Q6A162 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
KRT40Q6A162 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT40Q6A162 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
KRT40Q6A162 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
KRT40Q6A162 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT40Q6A162 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
KRT40Q6A162 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.89■■□□□ 1.1
KRT40Q6A162 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT40Q6A162 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT40Q6A162 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT40Q6A162 PRSS44-201ENST00000515154 1146 ntBASIC21.89■■□□□ 1.09
KRT40Q6A162 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT40Q6A162 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT40Q6A162 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT40Q6A162 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT40Q6A162 AC093525.10-201ENST00000625130 1569 ntBASIC21.89■■□□□ 1.09
KRT40Q6A162 AL138781.2-201ENST00000617896 1843 ntBASIC21.89■■□□□ 1.09
KRT40Q6A162 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT40Q6A162 AL031598.1-201ENST00000561511 1773 ntBASIC21.89■■□□□ 1.09
KRT40Q6A162 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms