Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC079598.2-202ENST00000546624 1451 ntBASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 OR6D1P-202ENST00000641007 5290 ntBASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC096733.2-201ENST00000609937 1394 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 PKD1P1-201ENST00000458669 6805 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 MMP23A-201ENST00000234610 1017 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 FITM1-202ENST00000559294 800 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 AP005242.2-201ENST00000580065 1175 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQA1Q5Y7H0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 AL390955.1-201ENST00000428694 934 ntBASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 TSPY15P-201ENST00000457163 923 ntBASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 BX088651.1-201ENST00000540551 451 ntBASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQA1Q5Y7H0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DQA1Q5Y7H0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.64■□□□□ 0.42
HLA-DQA1Q5Y7H0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DQA1Q5Y7H0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms