Protein–RNA interactions for Protein: Q5VZK9

CARMIL1, F-actin-uncapping protein LRRC16A, humanhuman

Predictions only

Length 1,371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1Q5VZK9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 Z82202.1-201ENST00000623446 1880 ntBASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC30.69■■■□□ 2.5
CARMIL1Q5VZK9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 FOSL1P1-201ENST00000511041 816 ntBASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 AL160237.2-201ENST00000556165 472 ntBASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 LINC01006-201ENST00000333319 2292 ntBASIC30.68■■■□□ 2.5
CARMIL1Q5VZK9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 AL121772.3-201ENST00000610840 674 ntBASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 TREX1-205ENST00000625293 1783 ntBASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 AC112907.3-201ENST00000577781 2400 ntBASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CARMIL1Q5VZK9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 AC106795.1-205ENST00000512851 1056 ntBASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 AC005332.3-201ENST00000589904 676 ntBASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 KATNBL1P6-202ENST00000562413 1466 ntBASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 AC091304.2-201ENST00000564639 760 ntBASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 SLC25A6P4-201ENST00000586535 553 ntBASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CARMIL1Q5VZK9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 MIR564-202ENST00000385049 94 ntBASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC30.65■■■□□ 2.5
CARMIL1Q5VZK9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 AP002469.2-201ENST00000531724 424 ntBASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 BMF-207ENST00000559701 630 ntTSL 3 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC30.64■■■□□ 2.5
CARMIL1Q5VZK9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC30.64■■■□□ 2.49
CARMIL1Q5VZK9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 KRT8P32-201ENST00000512863 1461 ntBASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 PWWP2AP1-201ENST00000429776 2273 ntBASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CARMIL1Q5VZK9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 AC233702.3-201ENST00000578656 1387 ntBASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CARMIL1Q5VZK9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms